Skip to content
logo
CCP5 Summer School 4.0.0 documentation
Day 9-11 Biomolecular simulations
Initializing search
    • Introduction to Work Environment
    • Day 1-2: Introduction to Modern Fortran
    • Day 1-2: Introduction to Python
    • Day 3: Statistical Mechanics Problems
    • Day 4 Monte Carlo integration
    • Day 4 Monte Carlo at Constant Pressure
    • Day 5 Introduction to Molecular Dynamics
    • Day 5 Phase equilibria
    • Day 6 Stability and Accuracy of Molecular Dynamics
    • Day 6 Constraints: Multiple timesteps and RATTLE
    • Day 8 Force-fields, potentials and optimisation methods
    • Day 8 MD Ensembles: NVE and NVT
    • Day 9: Setup environment for advanced courses
    • Day 9-11 Mesoscale: Introduction
    • Day 9 Mesoscale: DPD Tutorial Exercise 1: Simple DPD systems
    • Day 9 Mesoscale: DPD Tutorial Exercise 2: Applying DPD to molecular systems
    • Day 10 Mesoscale: LBE Tutorial Exercise 1: Single component LBE simulations
    • Day 11 Mesoscale: LBE Tutorial Exercise 2: Multi-Component LBE simulations
    • Day 9-11: First principles: CRYSTAL Tutorials
    • Day 9: First Principles: Castep Simulation
    • Day 9-11: First Principles: Phonons and Spectroscopy Tutorial
    • Day 10: Band Structure and DOS Calculation of ZnS
    • Day 9-11 Machine Learning Interatomic Potentials
    • Day 9-11 Biomolecular simulations
      • Instructors
      • Material
    • Day 11: First principles: BigDFT Tutorials
    • Appendix A: Plotting “.csv” files with gnuplot
    • Appendix B: The Boltzmann Equation - an outline derivation
    • Appendix C: Outline Notes on Fluid Mechanics
    • Instructors
    • Material

    Day 9-11 Biomolecular simulations¶

    Instructors¶

    Matteo Degiacomi (MD) – Durham University Antonia Mey (AM) – University of Edinburgh

    Material¶

    • Tutorial material: Biomolecular simulation tutorial content

    Previous Day 9-11 Machine Learning Interatomic Potentials
    Next Day 11: First principles: BigDFT Tutorials
    © Copyright 2017-2024, CCP5.
    Created using Sphinx 7.4.7. and Sphinx-Immaterial